WebJun 3, 2024 · Conclusions: BrownieCorrector is benchmarked using six real Illumina datasets for different eukaryotic genomes. The prior use of BrownieCorrector improves … Browniecorrector is a targeted error correction for short Illumina reads. unlike other error corrections which correct all the library, it focuses on the correction of only those reads that contain low complexity k-mers like homopolymers as such poly (A/ T). The main pipeline has four main steps: 1.selection of a highly … See more These instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See more The installation is now simple. First, clone browniecorrector from the Github address From this directory, run the following commands: The build directory should be named as the release, otherwise, you need to change that … See more This package requires a number of packages to be install on your system. Required: CMake; Google's Sparsehash; gcc (GCC 4.7 or a more recent version) Optional: ZLIB; … See more To run BrownieCorrector, you need to run the runPipeLine.sh script in the bashScrips folder. You need to provide the script three arguments like this : The first argument is inputReadFile is the Fastq file library in which the read pairs … See more
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Adjusting threads · Issue #4 · biointec/browniecorrector · …
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